Two light rails in 2 similar cities, way different success.

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San Diegos, which is the most traveled light rail in the USA, and 4th in North America, vs San Joses, which is near the bottom of light rail ridership.

Any possible reasons for the huge disparency?

Haven't been on it, but I understand San Diego's goes to lots of interesting places, including beaches & Tijuana. Not so much in Silicon Vallley; the line runs mostly through industrial areas.